廖波[湖南大學教授]

姓名:廖波

性別:男

出生年月: 1974.6

籍貫:湖南邵陽

民族:漢族

學習經歷

1999.09-2001.07大連理工大學 計算數學

2001.09-2004.06大連理工大學 計算數學

2004.06-2006.05 中國科學院研究生院 生物信息處理

2004.06-2006.05 中國科學院研究生院博士後。

2005年來校工作至今。

研究領域

1. 智慧型與生物信息處理

2. 腫瘤信息學方法

3. 數據挖掘算法

4. DNA編碼的防偽技術

5. 生物識別技術及套用

6.區域醫療信息化

學術兼職:Nature 雜誌顧問團專家成員, 國際雜誌 Current Chinese Science 雜誌主編,EI雜誌Journal of Convergence Information Technology生物信息專題主編,國際SCI雜誌MATCH Communications in Mathematical and in Computer Chemistry和Current Computer-Aided Drug Design編委, 國際雜誌International Journal of Analyzing Methods of Components and Combinatorial Biology in Mathematics;Biostatistics, Bioinformatics and Biomathematics International Journal of Engineering and Industries Journal of Next Generation Information Technology的編委, 國際SCI雜誌Bioinformatics等20家雜誌的審稿人

教學情況

博士生學位課程“計算機科學中的數學方法”主講

留學博士生學位課程“Mathematical methods on computer science”主講

研究生學位課程“模糊數學原理及套用”、“組合數學”、“生物信息學基礎” 和“生物信息處理” 主講

留學生學位課程“High Scientific Computing” 主講

研究生選修課程“計算分子生物學” 主講

本科生必修課程“離散數學”、“大學信息技術基礎”主講

本科生選修課程“生物信息學中的計算機技術” 主講

課題(包含近期主持、主研主要教學科研項目):

1. 2010-2012, 國家自然科學基金,蛋白質組信息分析及套用算法研究,主持

2. 2006-2008, 國家自然科學基金,數學方法在計算分子生物學中的套用,主持

3. 2009-2011, 湖南省科技計畫, 生物信息學方法在腫瘤蛋白質組學研究中的套用,主持

4. 2005-2006,中國博士後科學基金,數學方法在RNA二級結構中的套用,主持

5. 2007-2009,湖南省自然科學基金,一種特徵基因選擇算法及其在血吸蟲基因組分析中的套用,主持

6. 2004-2006,中科院百人計畫項目,數理分子生物學,子項目負責人

7. 2005-2007,湖南大學科學基金重點項目,生物序列的圖形表示及套用,主持

科研項目獲獎情況

年度 項目名稱 獎勵類別 等級 排名
2009 新型表達模式下的生物信息學方法研究 湖南省科技獎自然科學類 二等獎 1
2009 信息科學青年科學之星 Scopus青年科學之星 一等 個人
2010 RNA二級結構的一種編碼方法及其套用 湖南省自然科學優秀論文獎 一等 1

代表性論文

已在國際 SCI 核心期刊上發表或接受學術論文 62 篇(影響因子 4 以上的論文 7 , 影響因子 3 以上的論文 16 , 影響因子 2 以上的論文 12 篇),目前 SCI 收錄 57 篇, EI 檢索 21 篇,被引用累計六百餘次):

1. Bo Liao, Tianming Wang, General Combinatorics of RNA Hairpins and Cloverleaves, J. Chem. Inf. Comput. Sci.,43 (4),2003,1138-1142. (SCI, EI, 影響因子 3.423 )

2. Chunxin Yuan, Bo Liao, Tianming Wang, New 3D graphical representation of DNA sequences and their numerical characterization, Chemical Physic Letters ,379 ,2003, 412-417. (SCI, 影響因子 2.207)

3. Bo Liao, Tianming Wang, Analysis of similarity of DNA sequences based on 3D graphical representation, Chemical physics letters, 388, 2004,195-200. (SCI, 影響因子 2.207)

4. Bo Liao, Tianming Wang, A 3D Graphical representation of RNA secondary structure, Journal of Bimolecular Structure Dynamics, 21 (6), 2004,827-832. (SCI, 影響因子 1.413)

5. Bo Liao, Tianming Wang, New 2D Graphical representation of DNA sequences, Journal of computational chemistry, 259(11),2004,1364-1368. (SCI、EI, 影響因子 4.297)

6. Bo Liao, Tianming Wang, General Combinatorics of RNA Secondary Structure, Mathematical Biosciences,191,2004,69-81. (SCI, EI, 影響因子 1.186)

7. Bo Liao, Tianming Wang, 3D graphical representation of DNA sequences and their numerical characterization, Journal of Molecular Structure: THEOCHEM, 681,2004,209-212. (SCI, 影響因子 1.112)

8. Bo Liao, Tianming Wang, Analysis of similarity of DNA sequences based on non-overlapping triplets of nucleotide bases, Journal of Chemical Information and Computer Science, 44,2004,1666-1670. (SCI, EI, 影響因子 3.423)

9. Bo Liao, Tianming Wang, Kequan Ding,On A Six-Dimensional Representation of RNA Secondary Structures, Journal of Bimolecular Structure Dynamics, 22,2004,455-464. (SCI, 影響因子 1.413)

10. Bo Liao, A 2D graphical representation of DNA sequence, Chemical Physic Letters, 401 2005,196-199. (SCI, EI, 影響因子 2.207)

11. Bo Liao, Mingshu Tan, Kequan Ding, A 4D representation of DNA sequences and its application, Chemical Physic Letters, 402,2005,380-383. (SCI, EI, 影響因子 2.207)

12. Bo Liao, Tianming Wang, Kequan Ding, On A Seven-Dimensional Representation of RNA Secondary Structures,Lecture Series on Compute and Computational Science, 1,2004, 310-312. (SCI)

13. Yusen Zhang, Bo Liao, Kequan Ding, On 2D graphical representation of DNA sequence of non-degeneracy, Chemical Physic Letters, 411,2005,28-32. (SCI, EI , 影響因子 2.207)

14. Bo Liao, Yusen Zhang, Kequan Ding, Analysis of similarity/dissimilarity of DNA sequences based on a condensed curve representation, Journal of Molecular Structure: THEOCHEM, 717,2005,199-203. (SCI, 影響因子 1.112)

15. Bo Liao, Tianming Wang, Largest common substructure of RNA structure, Internet Journal of Molecular Design, 3,2004,361-367.

16. Bo Liao, Kequan Ding, Graphical Approach to analyzing DNA sequences, Journal of Computational Chemistry, 26,2005,1519-1523. (SCI,EI, 影響因子 4.297)

17. Wen Zhu, Bo Liao, Kequan Ding, A condensed 3D Graphical representation of RNA secondary structures, Journal of Molecular Structure: THEOCHEM, 757,2005,193–198. (SCI,通信作者, 影響因子 1.112)

18. Bo Liao, MingshuTan, Kequan Ding, Application of 2D graphical representation of DNA sequence, Chemical Physic Letters, 414,2005,296–300. (SCI, EI, 影響因子 2.207)

19. Bo Liao, Tianming Wang, Kequan Ding, On a seven-dimensional representation of RNA secondary structures,Molecular Simulation, 31(14),2005 1063-1071. (SCI, 影響因子 1.133)

20. Yuhua Yao, Bo Liao, Tianming Wang, A 2D graphical representation of RNA secondary structures and the analysis of similarity/dissimilarity based on it, Journal of Molecular Structure: THEOCHEM, 755,2005,131-136.(SCI, 影響因子 1.112)

21. Bo Liao, Kequan Ding, A 3D graphical representation of DNA sequences and its application, Theoretical Computer Science, 358,2006,56-64. (SCI, 影響因子 0.735)

22. Jiawei Luo, Bo Liao, Renfa Li, Wen Zhu, RNA Secondary Structure 3D Graphical Representation Without Degeneracy, Journal of Mathematical Chemistry, 39 ,2006,629-636. (SCI,通信作者, 影響因子 1.057)

23. Bo Liao, Wen Zhu, Analysis of similarity/dissimilarity of DNA primary sequences based on condensed matrices and information entropies, Current Computer-Aided Drug Design, 2, 2006, 95-103.

24. Bo Liao, Jiawei Luo, Renfa Li, Wen Zhu, RNA Secondary structure 2D graphical representation without degeneracy, International Journal of Quantum Chemistry, 106 (8), 2006,1749-1755. (SCI,EI, 影響因子 1.368)

25. Bo Liao, Yanshu Liu, Renfa Li, Wen Zhu, Coronavirus phylogeny based on triplets of nucleic acids bases, Chemical Physic Letters, 421,2006,313-318. (SCI,EI, 影響因子 2.207).

26. Bo Liao, Xuyu Xiang, Wen Zhu, Coronavirus phylogeny based on 2D graphical representation of DNA sequence, Journal of Computational Chemistry,27(11),2006,1196-1202. (SCI,EI, 影響因子 4.297).

27. Weiping Wang, Bo Liao, Tianming Wang, A graphical method to construct phylogenetic tree, International Journal of Quantum Chemistry,106(9),2006,1998-2005.(SCI,EI,通信作者, 影響因子 1.368)

28. Bo Liao,Wen Zhu, Yang Liu, 3D graphical representation of DNA sequence without degeneracy and its applications in constructing phylogenic tree, MATCH Communications in Mathematical and in Computer Chemistry,56,2006,209-216.(SCI, 影響因子 3.5)

29. Bo Liao, Xinzhou Shan, Wen Zhu, Renfa Li, Phylogenetic tree construction based on 2D graphical representation, Chemical Physic Letters,422(1-3),2006,282-288.(SCI,EI , 影響因子 2.207)

30. Bo Liao, Xuyu Xiang, Renfa Li, Wen Zhu, On the similarity of DNA primary sequences based on 5D representation, Journal of Mathematical Chemistry, 42(1),2007, 47-57.(SCI, 影響因子 1.057)

31. Bo Liao, Wen Zhu, Pengcheng Li, On a four-dimensional representation of RNA secondary structures,Journal of Mathematical Chemistry, 42(4),2007, 1015-1021.(SCI, 影響因子 1.057)

32. Yusen Zhang, Bo Liao, Kequan Ding, On 3DD-curves of DNA sequences, Molecular Simulation, 32(1),2006, 29–34.(SCI , 影響因子 1.133)

33. Wen Zhu, Bo Liao, Jiawei Luo, Renfa Li, Numerical Characterization and Similarity Analysis of Neurocan Gene, MATCH Communications in Mathematical and in Computer Chemistry,57(1) 2007,143-155.(SCI,通信作者, 影響因子 3.5)

34.Yusen Zhang, Wei Chen, Bo Liao, Xinbo Gong, A Method for Obtaining Integrable Couplings, Communications in Theoretical physics, 45(6),2006, 1000-1002.(SCI, 影響因子 0.676)

35. Bo Liao, Jiawei Luo, Renfa Li, Wen Zhu, Novel method for analyzing proteome, International Journal of Quantum Chemistry, 107(6),2007,1295-1300.(SCI, 影響因子 1.368)

36. Bo Liao, Wen Zhu, Jiawei Luo, Renfa Li, RNA Secondary Structure Mathematical Representation without Degeneracy, MATCH Communications in Mathematical and in Computer Chemistry,57(3),2007,687-695.(SCI, 影響因子 3.5)

37.Guohua Huang, Bo Liao, Wu Zhang, Fei Gong, A Novel Method for Sequence Alignment and Mutation Analysis, MATCH Communications in Mathematical and in Computer Chemistry,59(3),2008,635-645.(SCI,通信作者, 影響因子 3.5)

38. Bo Liao, Ceng Zeng, Fuqiang Li, Yong Tang, Analysis of Similarity/Dissimilarity of DNA Sequences Based on Dual Nucleotides, MATCH Communications in Mathematical and in Computer Chemistry,59(3),2008,647-652.(SCI, 影響因子 3.5)

39.Weiyang Chen , Bo Liao,Yanshu Liu, Wen Zhu, Zhizhong Su, A numerical representation of DNA sequence and its applications, MATCH Communications in Mathematical and in Computer Chemistry,60(2),2008,291-300. (SCI,通信作者, 影響因子 3.5)

40.Zhi Cao, Bo Liao, Renfa Li, A group of 3D graphical representation of DNA sequences based on dual nucleotides, International Journal of Quantum Chemistry,108,2008,1485-1490.(通信作者,SCI, 影響因子 1.368)

41.Guohua Huang, Bo Liao, Yongfan Li, Zanbo Liu,H–L curve: A novel 2D graphical representation for DNA sequences,Chemical Physics Letters, 462(1-3), 2008, 129-132(SCI,通信作者, 影響因子 2.207)

42.Weiyang Chen, Bo Liao, Wen Zhu, Hao Liu, Qingguang Zeng, An ant colony pairwise alignment based on the dot plots Journal of Computational Chemistry,2009 30 93-97 (SCI,EI,通信作者, 影響因子 4.297)

43. Yongfan Li , Guohua Huang, Bo Liao, Zanbo Liu, H-L Curve: A Novel 2-D Graphical Representation of Protein Sequences, MATCH Communications in Mathematical and in Computer Chemistry,61(2),2009,519-532 (SCI,通信作者, 影響因子 3.5)

44.Zanbo Liu, Bo Liao, Wen Zhu, A New Method to Analyze the Similarity Based on Dual Nucleotides of the DNA Sequence, MATCH Communications in Mathematical and in Computer Chemistry,61(2),2009,541-552(SCI,通信作者, 影響因子 3.5)

45.Weiyang Chen, Bo Liao, Xuyu Xiang,Wen Zhu, An Improved Binary Representation of DNA Sequences and Its Applications,MATCH Communications in Mathematical and in Computer Chemistry,61(3),2009,767-780(通信作者,SCI, 影響因子 3.5)

46.Zanbo Liu, Bo Liao, Wen Zhu, Guohua Huang, A 2-D graphical representation of DNA sequence based on dual nucleotides and its application, International Journal of Quantum Chemistry,109(5),2009,948-958(通信作者,SCI, 影響因子 1.368)

47.Weiyang Chen, Bo Liao, Wen Zhu, Xuyu Xiang, Multiple sequence alignment algorithm based on a dispersion graph and ant colony algorithm, Journal of Computational Chemistry, (13)30,2009,2031-2038 ( 通信作者,SCI , 影響因子 4.297)

48.Yan Lu, Bo Liao, Wen Zhu, Xinyuan Zhou,Identify the most significant genes based on Prim algorithm of minimal spanning tree,Journal of Computational and Theoretical Nanoscience, 6(5),2009, 1136–1139 ( 通信作者, SCI, 影響因子 0.981)

49. Bo Liao, Weiyang Chen, Xingming Sun,Wen Zhu, A binary coding method of RNA secondary structure and its application, Journal of Computational Chemistry, 30(14),2009,2205-2212(SCI, 影響因子 4.297)

50.Zhi Cao, Bo Liao, Renfa Li, Wen Zhu,A three-dimensional cube representation of RNA secondary

structure and its application,Journal of Computational and Theoretical Nanoscience, 6,2009,1474-1481 ( 通信作者, SCI , 影響因子 0.981)

51. Hao Liu, Bo Liao, Zhi Cao, Renfa Li, Node Based clustering method on protein-protein interaction network,Journal of Computational and Theoretical Nanoscience, 2009,6(10),2198-2202( 通信作者, SCI , 影響因子 0.981)

52. Li Zhang, Bo Liao, Dachao Li, Wen Zhu, A novel representation for apoptosis protein subcellular localization prediction using support vector machine, Journal of Theoretical Biology , 259,2009,361-365 ( 通信作者, SCI , 影響因子 2.454)

53. Guohua Huang, Bo Liao, Rongfan Li, Similarity studies of DNA sequences based on a new 2D graphical representation, Biophysical Chemistry, 143,2009,55-59 ( 通信作者, SCI , 影響因子 2.361)

54. Xuyu Xiang, Bo Liao, Dafang Zhang, Jiawei Luo, A binary coding method for RNA secondary structure alignment,Journal of Computational and Theoretical Nanoscience, ( 通信作者, SCI , 影響因子 0.981)

55. Li Xi, Bo Liao, Zeng Qingguang, Luo Jiawei, Protein functional class prediction using global encoding of amino acid sequence, Journal of Theoretical Biology , 261,2009,290-293 ( 通信作者, SCI , 影響因子 2.454)

56. Bo Liao, Xing Li, Luo Jiawei, Zeng Qingguang, Zhu Wen, A Novel Method for Feature Gene Selection based on Geodesic Distance, Journal of Computational and Theoretical Nanoscience, 2010( 通信作者, SCI , 影響因子 0.981)

57. Zhi Cao, Bo Liao, Renfa Li, Luo Jiawei, Zhu Wen, RNA secondary structure alignment based on an extended binary coding method, International Journal of Quantum Chemistry, 2010, ( 通信作者, SCI , 影響因子 1.368)

58. Wen Zhu, Bo Liao, Rentalfa Li, A Novel method for constructing phylogenetic tree based on a dissimilarity matrix, MATCH Communications in Mathematical and in Computer Chemistry, 2010, 483-492 ( 通信作者, SCI , 影響因子 3.5)

59. Bo Liao, Lijiao Liao, Guangxue Yue, Ronghui Wu, Wen Zhu, A Vertical and horizontal method for constructing phylogenetic tree, MATCH Communications in Mathematical and in Computer Chemistry, 2010, 691-700( 通信作者, SCI , 影響因子 3.5)

60.Weifeng Jia, Bo Liao, Dachao Li,Jiawei Luo, Protein function prediction using a double weighted k-nearest neighbor method,Journal of Computational and Theoretical Nanoscience, 2010 (通信作者, in press, 影響因子 0.981)

61. Bo Liao, Qianfeng Liu,Qingguang Zeng, Jiawei Luo,Guangxue Yue, An approach for data selection of protein function predictio, MATCH Communications in Mathematical and in Computer Chemistry, 65(2),2010,459-468(SCI , 影響因子 3.5)

62. Bo Liao, Benyou Liao, Xingming Sun, Qingguang Zeng , A Novel method for similarity analysis and protein subcellular localization prediction, Bioinformatics, 2010,26(21),2678-2683 (SCI , 影響因子 4.926)

63. Xinyuan Zhou, Bo Liao, Lijiao Liao, Xinguo Lu, A Discrete Measure for Phylogenetic Construction Based on Information Gain, MATCH Communications in Mathematical and in Computer Chemistry, 66(1),2011 (通信作者,SCI , 影響因子 3.5)

64. 廖波,王天明,一類RNA二級結構的計數,《套用數學》2(2002) 109-112

65. 廖波,王天明,RNA 二級結構的最小自由能算法,《生物數學學報》 18(3) 2003, 364-368

66. 廖波,王天明,RNA 二級子結構的計數,《生物數學學報》4(2004)

67.袁春欣, 廖波,王天明,mRNA 序列與蛋白序列的對比,《大連理工大學學報》6(44),2004,925-927(EI)

68.白風蘭, 廖波,王天明,拓撲指數在生物序列相似性比較中的套用,生物數學學報,2006,21(4),521-530

69.李鵬程, 廖波,羅娟,吳迪,無線感測器網路中一種移動節點定位算法,小型微型計算機系統,2008,29(11),2051-1054

70.劉昊, 廖波,彭麗紅,基於蛋白質相互作用網路的聚類算法研究,計算機工程與套用,2008,44(30),142-144

71.彭麗紅, 廖波,劉昊,基於蛋白質相互作用網路圖的聚類方法,計算機工程與套用,2008,44(32),132-134

72.蘇志忠, 廖波,陳維洋,一種基於信息理論的新分子序列度量法,計算機與套用化學,2009,26(11),1380-1384

73.周芳, 廖波,一種改進的蟻群算法及其在2DHP格點模型中的套用,計算機工程與設計,2009,30(22),5175-5177

出版教材

[1] 主編“數值計算與最最佳化原理-MATLAB實現”,北京郵電大學出版社,2007

[2] 主編“數值計算與最最佳化原理學習指導與習題解析”,北京郵電大學出版社,2008

[3]參編“ACM程式競賽培訓教程”,中國鐵道出版社,2007

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