張曉君[上海交通大學生命科學技術學院研究員]

張曉君,上海交通大學生命科學技術學院研究員。研究方向:微生物分子生態學、涉及工業廢水微生物處理過程微生物群落結構與功能分析、功能菌分離、功能基因的克隆、元基因組學、以及農業土壤環境的分子生態學、石油油藏微生物分子分析等方面的研究。

個人簡歷

1990年和1995年在蘭州大學生物系分別獲學士和碩士學位;

2002年在中科院寒區旱區環境與工程研究所獲得博士學位;

1995年-1999年,在蘭州大學生物系任教(講師);

2002年-2004年挪威農業大學(現挪威生命科學大學)化學與生物技術系博士後;

2004年-2012年上海交通大學生命學院任副教授;

2006年-2007年在法國里昂第一大學微生物生態學實驗室(UMR CNRS 5557)訪問研究。

2013年- 上海交通大學生命學院,微生物代謝國家重點實驗室 研究員

2006年起擔任中國微生物學會環境微生物專業委員會委員,上海市微生物學會環境微生物專業委員會委員。2011年起任上海市微生物學會理事,《微生物學通報》編委, PLoS ONE、Research in Microbiology等國際SCI刊物及國內多個核心期刊的審稿人。

發表論文

1. Xiaojun Zhang*, Jeseph Nesme, Pascal Simonet and Asa Frostegard. Fate of invading bacteria in soil and survival of transformants after simulated uptake of transgenes, as evaluated by a model system based on lindane degradation. Research in Microbiology, 2012,163:200-210.

2. Bing Xie, Shunzi Xiong, Shaobo Liang, Chong Hu, Xiaojun Zhang, Jun Lu.. Performance and bacterial compositions of aged refuse reactors treating mature landfill leachate. Bioresource Technology, 2012, 103:71-77. (Joint first authors)

3. Xu W., Huang Z., Zhang X., Li Q., Lu Z., Shi J., Xu Z., Ma Y. Monitoring the microbial community during solid-state acetic acid fermentation of Zhenjiang aromatic vinegar. Food Microbiology, 2011, 28(6):1175-1181

4. Ren H, Zhang X*, Song Z, Rupert W, Gao G, Guo S, Zhao L. Comparison of Microbial Community Compositions of Injection and Production Well Samples in a Long-term Water-Flooded Petroleum Reservoir. PLoS One, 2011,6(8): e23258. doi:10.1371/journal.pone.0023258

5. Zhang X*,Yue S, Zhong H, Hua W, Chen R, Cao Y, and Zhao L. A diverse bacterial community in an anoxic quinoline-degrading bioreactor determined by using pyrosequencing and clone library analysis. Applied Microbial and Biotechnology, 2011, 91:425–434.

6. Wang Tingting, Zhang Xiaojun*, Zhang Menghui, Wang Linghua, Zhao Liping. Development of a fluorophore-ribosomal DNA restriction typing method for monitoring structural shifts of microbial communities. Archives in Microbiology, 2011, 193:341–350.

7. Lu, H., Wu, W., Chen, Y., Zhang, X., Devare, M., Thies, J.E. Decomposition of Bt transgenic rice residues and response of soil microbial community in rape seed-rice cropping system. Plant and Soil, 2010, 336:279-290.

8. Hong X, Zhang X*, Liu B, Mao Y, Liu Y, and Zhao L. Structural differentiation of microbial communities in two efficient indole degrading bioreactors using different treatment processes. Research in Microbiology, 2010,161(8): 687-693.

9. Mao Y, Zhang X*, Xia X, Zhong H, Zhao L. Versatile aromatic compound-degrading capacity and microdiversity of Thauera strains isolated from a coking wastewater treatment bioreactor. J Ind Microbiol Biotechnol. 2010,37:927-934.

10. Zhang C, Zhang M, Wang S, Han R, Cao Y, Hua W, Mao Y, Zhang X, Pang X, Wei C, Zhao G, Chen Y, Zhao L.. Interactions between gut microbiota, host genetics, and diet relevant to development of metabolic syndromes in mice. ISME J, 2010. 4(2): 232-241. (SCI IF:5.039)

11. Wang L., Jin Y., Zhao L. , Pang X. and Zhang X*. ERIC-PCR-based strain-specific detection of phenol-degrading bacteria in activated sludge of wastewater treatment systems. Letters in Applied Microbiology, 2009, 49:522-528.

12. Zhang X, Ma X, Wang N, Yao T. New subgroup of Bacteroidetes and diverse microorganisms in Tibetan plateau glacial ice provide a biological record of environmental conditions. FEMS Microb. Ecol., 2009, 67:21-29.

13. Mao Y, Zhang X*, Yan X, Liu B, Zhao L. Development of group-specific PCR-DGGE fingerprinting for monitoring structural changes of Thauera spp. in an industrial wastewater treatment plant responding to operational perturbations. J Microbiol Methods. 2008,75: 231–236.

14. Yang C, Cao G, Li Y, Zhang X, Ren H, Wang X, Feng J, Zhao L, Xu P. A Constructed Alkaline Consortium and Its Dynamics in Treating Alkaline Black Liquor with Very High Pollution Load. Plos One, 2008, 3(11):e3777. 20. doi:10.1371/journal.pone.0003777.

15. Wang H, Zhang X, Zhao L, Xu Y. Analysis and comparison of the bacterial community in fermented grains during the fermentation for two different styles of Chinese liquor. J Ind Microbiol Biotechnol., 2008, 35:603–609.

16. Yan X, Z Xu, X Feng, Y Liu, B Liu, X Zhang, C Zhu, L Zhao. Cloning of Environmental Genomic Fragments as Physical Markers for monitoring Microbial populations in Coking Wsatewater Treatment System. Microbial Ecology. 2007, 53:163-172.

17. Liu B, Zhang F, Feng X, Liu Y, Yan X, Zhang X, Wang L, Zhao L. Thauera and Azoarcus as Functionally Important Genera in a Denitrifying Quinoline Removal Bioreactor as Revealed by Microbial Community Structure Comparison. FEMS Microbiology Ecology, 2006, 55 (2): 274-286

科研成果

近幾年主要從事環境微生物生態學的研究工作。先後主持兩項國家自然科學基金項目和863重點項目子課題、上海市國際合作項目、上海市農委重點攻關項目、教育部回國留學人員啟動基金等科研項目,還承擔其它橫向課題。開展了對焦化廢水這一難降解工業廢水的微生物群落的深入研究,通過以喹啉反硝化降解反應器為模型揭示了菌群結構和特定基因組成及其變化規律;特別關注Thauera屬細菌這類重要的污染物分解菌,創建了一套分析Thauera屬細菌的方法,為研究重要降解功能菌奠定了良好基礎;在分子標識物引導的群落內關鍵菌群的分離技術方面有所創新,並分離了一批反硝化降解菌,研究了這些降解菌的特性。與挪威農業大學合作研究農田土壤系統中反硝化菌群與氮循環關係,揭示了反硝化基因表達與調控機制。還對油藏極端環境的微生物生態學開展了探索研究,提出一些獨特的觀點。在國內外刊物上發表論文60餘篇,其中SCI論文20餘篇。獲上海交通大學晨星學者、優秀教師等獎勵。現任中國微生物學會環境微生物專業委員會委員,上海市微生物學會理事。

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