主要成就
科研成就
陳士林在國際上創建了基於ITS2的中草藥DNA條形碼鑑定方法體系,完成專著《中國藥典中藥材DNA條形碼標準序列》,從基因層面解決中草藥物種真偽鑑定的難題,被評為2016中國十大醫學進展 ;
通過全基因組解析提出靈芝為首箇中藥基原藥用模式真菌,被Nature China 選為中國最佳研究亮點推介 ;
完成並發表人參 、丹參、赤芝 、菊花、卷柏 、穿心蓮、紫芝 等全基因組圖譜 和相關組學研究,成功培育並獲批4箇中藥材新品種證書或良種證書,開拓奠定《本草基因組學》學科基礎並由科學出版社出版 ,列為全國高等醫藥院校規劃教材 ;
完成並編著《中國中藥材產地生態適宜性數值區劃》,避免中藥材盲目引種栽培,主持無公害種植項目成功推廣套用 ;
獲教育部高校成果科技進步一等獎1項 ,國家科技進步二等獎3項 。
獲國家發明專利和美國專利授權36項 ,發表論文400餘篇,其中SCI 論文200餘篇,包括國際著名期刊 Nature Communications,PNAS等,論文被他引1.5萬餘次,H指數58(Google Scholar),連續四年入選Elsevier高被引中國學者榜單 。
主要論文
1.ShilinChen*.;Xu,J.;Liu,C.;Zhu,Y.;Nelson,D.R.;Zhou,S.;Li,C.;Wang,L.;Guo,X.;Sun,Y.;HLuo,YLi,JSong,BHenrissat,ALevasseur,JQian,JLi,XLuo,LShi,LHe,LXiang,XXu,YNiu,QLi,MiraV.Han,HYan,JZhang,HChen,ALv,ZWang,MLiu,DavidC.Schwartz&CSun*.GenomesequenceofthemodelmedicinalmushroomGanodermalucidum.Naturecommunications2012,3,913.2.Song,C;Liu,Y;Song,A;Dong,G;Zhao,H;Sun,W;Ramakrishnan,Shyam;Wang,Y;Wang,S;Li,T;Niu,Y;Jiang,J;Dong,B;Xia,Y;Chen,S;Hu,Z;Chen,F;Chen,ShilinTheChrysanthemumnankingensegenomeprovidesinsightsintotheevolutionanddiversificationofchrysanthemumflowersandmedicinaltraits.Molecularplant,2018Vol:11(12):1482-1491
3.ShilinChen*.;Song,J.;Sun,C.;Xu,J.;Zhu,Y.;Verpoorte,R.;Fan,T.-P.*,Herbalgenomics:Examiningthebiologyoftraditionalmedicines.Science2015,347(6219),S27-S29.
4.XuJ,ChuY,LiaoB,XiaoS,YinQ,BaiR,SuH,DongL,LiX,QianJ,ZhangJ,ZhangY,ZhangX,WuM,ZhangJ,LiG,ZhangL,ChangZ,ZhangY,JiaZ,LiuZ,DanielAfreh,RuthNahurira8,ZhangL,ChengR,ZhuY,ZhuG,RaoW,ZhouC,QiaoL,HuangZ,ChengYung-Chi,ChenShilin,PanaxginsenggenomeexaminationforginsenosidebiosynthesisGigaSciencedoi:10.1093gix093,2017
5.SunW;LengL;YinQ;XuM;HuangM;XuZ;ZhangY;YaoH;WangC;XiongC;ChenS;JiangC;XieN;ZhengX;WangY;SongC;ReubenJ.Peters,ThemedicinalplantAndrographispaniculategenomeprovidesinsightintobiosynthesisofthebioactivediterpenoidneoandrographolide,PlantJ2018
6.ChinaPlantBOLGroup,DZLIetal.,Comparativeanalysisofalargedatasetindicatesthatinternaltranscribedspacer(ITS)shouldbeincorporatedintothecorebarcodeforseedplants.ProceedingsoftheNationalAcademyofSciencesoftheUSA2011,108,19641-19646.
7.ZXu,TXin,DorotheaBartels,YLi,WGu,HYao,SLiu,HYu,XPu,JZhou,JXu,CXi,HLeiJingyuanSong,ShilinChen.GenomeanalysisoftheancienttracheophyteSelaginellatamariscinarevealsevolutionaryfeaturesrelevanttotheacquisitionofdesiccationtolerance.MolPlant2018.
8.Xu,Z.;Peters,R.J.;Weirather,J.;Luo,H.;Liao,B.;Zhang,X.;Zhu,Y.;Ji,A.;Zhang,B.;Hu,S.;Au,K.F.;Song,J*.;ShilinChen*,Full-lengthtranscriptomesequencesandsplicevariantsobtainedbyacombinationofsequencingplatformsappliedtodifferentroottissuesofSalviamiltiorrhizaandtanshinonebiosynthesis.ThePlantJournal2015.
9.ShilinChen*.;Pang,X.;Song,J.;Shi,L.;Yao,H.;Han,J.;Leon,C.,Arenaissanceinherbalmedicineidentification:frommorphologytoDNA.BiotechnologyAdvances2014,32(7),1237-1244.
10.HXu,JSong,HLuo,YZhang,QLi,YZhu,JXu,YLi,CSong,BWang,WSun,GShen,XZhang,JQian,AJi,ZXu,XLuo,LHe,CLi,CSun,HYan,GCui,XLi,XiLi,JWei,JLiu,YWang,AHayward,DNelson,ZNing,RJ.Peters,XQi,SChen.AnalysisoftheGenomeSequenceoftheMedicinalPlantSalviamiltiorrhizaMolPlant2016,Volume9,Issue6,p949–952.
11.Pang,X.;Song,J.;Zhu,Y.;Xu,H.;Huang,L.;ShiLinChen*.ApplyingplantDNAbarcodesforRosaceaespeciesidentification.Cladistics2011,27(2),165-170.
12.Zhu,Y.;Luo,H.;Zhang,X.;Song,J.;Sun,C.;Ji,A.;Xu,J.;ShiLinChen*.,AbundantandselectiveRNA-editingeventsinthemedicinalmushroomGanodermalucidum.Genetics2014,196(4),1047-1057.
13.Li,X.;Yang,Y.;Henry,R.J.;Rossetto,M.;Wang,Y.;ShiLinChen*,PlantDNAbarcoding:fromgenetogenome.BiologicalReviews2015,90(1),157-166.
14.DZhang;CJiang;CHuang;DWen;JLu;SChen;TZhang;YShi;JXue;WMa;LXiang;WSun;ShilinChen,Thelight-inducedtranscriptionfactorFtMYB116promotesaccumulationofrutininFagopyrumtataricum.PlantCell&Environment2018
15.JungChaoYuntaoDaiRobertVerpoortedWingLameYung-ChiChengeLi-HengPaoWeiZhangShilinChenMajorachievementsofevidence-basedtraditionalChinesemedicineintreatingmajordiseasesBiochemicalPharmacologyVolume139,1September2017,Pages94-10
16.HuangZ,,XuJ,,XiaoS,LiaoB,GaoY,ZhaiC,QiuX,XuWandChenShilin.Comparativeopticalgenomeanalysisoftwopangolinspecies:ManispentadactylaandManisjavanica.GigaScience2016,5,1-5
17.Li,Q.;Li,Y.;Song,J.*;Xu,H.;Xu,J.;Zhu,Y.;Li,X.;Gao,H.;Dong,L.;Qian,J.;Sun,C,ShilinChen*.,High-accuracydenovoassemblyandSNPdetectionofchloroplastgenomesusingaSMRTcircularconsensussequencingstrategy.NewPhytologist2014,204(4),1041-1049.
18.CWang,XSu,WSun,SZhou,JZheng,MZhang,MSun,JXue,XLiu,JXing,ShilinChen.,Efficientproductionofsuccinicacidfromherbalextractionresiduehydrolysate,BioresourceTechnology2018
榮譽表彰
獲吳階平醫藥創新獎 、Agilent Thought Leadership Award等榮譽 。獲教育部高校成果科技進步一等獎1項 ,國家科技進步二等獎3項 。
社會任職
現為教育部長江學者創新團隊負責人
擔任APSB, Chinese Medicine,CHM,《藥學學報》等刊副主編